Molekuláris Biotechnológiai és Mikrobiológiai Tanszék

1.

Papp, L. A., Adácsi, C., Ács-Szabó, L., Batta, G., Csoma, H., Pusztahelyi, T., Pócsi, I., Miklós, I.: Co-cultivation of Schizosaccharomyces japonicus and Fusarium graminearum reveals the biocontrol effect of yeast and its potential genes for detoxification.
Agriculture. 16 (5), 1-19, (article identifier: 494), 2026.

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Q1 Agronomy and Crop Science (2024)

Q2 Food Science (2024)

Q1 Plant Science (2024)

2.

Ambrus, V. A., Farkas, D., Király, A., Tóth, B., Dobránszki, J.: Comparative Transcriptomic Analysis of Two Apple Cultivars in Response to Dual Cytokinin Applied In Vitro.
Plants-Basel. 15 (7), 1-24, (article identifier: 1001), 2026.

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Q1 Ecology (2024)

Q1 Ecology, Evolution, Behavior and Systematics (2024)

Q1 Plant Science (2024)

3.

Imre, A., Kovács, R. L., Jakab, Á., Harmath, A., Németh, B., Nagy, F., Forgács, L., Balázsi, D., Majoros, L., Benkő, Z., Crook, N., Pócsi, I., Pfliegler, V. P.: ENA1 deficiency attenuates Saccharomyces 'boulardii' probiotic yeast virulence in immunosuppressed mouse fungaemia model.
Commun Biol. [Epub ahead of print], 1-36, 2026.

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D1 Agricultural and Biological Sciences (miscellaneous) (2024)

D1 Biochemistry, Genetics and Molecular Biology (miscellaneous) (2024)

D1 Medicine (miscellaneous) (2024)

4.

Szarka, M., Vig, I., Fenyvesi, A., Gila, C. B., Antal, K., Szikszai, Z., Pócsi, I., Emri, T.: Low-Intensity, Short-Duration Proton Irradiation Enhances Oxidative Stress Sensitivity of Aspergillus nidulans, with Transcriptomic Data Indicating Downregulation of Antioxidative Enzyme Genes.
J. Fungi. 12 (2), 1-17, (article identifier: 147), 2026.

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Q1 Ecology, Evolution, Behavior and Systematics (2024)

Q2 Microbiology (medical) (2024)

Q1 Plant Science (2024)

5.

Kovács, S., Brendzsák, B., Pfliegler, V. P., Nagy, L., Hamow, K. Á., Pócsi, I., Pusztahelyi, T.: Mutations and metabolic factors affecting interaction of toxigenic and atoxigenic Aspergillus flavus.
Microorganisms. 14 (2), 1-16, (article identifier: 473), 2026.

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Q2 Microbiology (2024)

Q2 Microbiology (medical) (2024)

Q2 Virology (2024)

6.

Steindorff, A. S., Cai, F. M., Ding, M., Emri, T., Miskei, M., Pócsi, I., Druzhinina, I. S.: Phenogenomics reveals the ecology and evolution of Trichoderma fungi for sustainable agriculture.
Nat Microbiol. 11 (3), 815-831, 2026.

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D1 Applied Microbiology and Biotechnology (2024)

D1 Cell Biology (2024)

D1 Genetics (2024)

D1 Immunology (2024)

D1 Microbiology (2024)

D1 Microbiology (medical) (2024)

7.

Harmath, A., Németh, B., Pócsi, I., Majoros, L., Pfliegler, V. P., Kovács, R. L.: Phylogenomic diversity of clinical Saccharomyces cerevisiae and the prevalence of probiotic-derived isolates in a tertiary care center in Hungary.
Microbiol. Spectr. 14 (1), 1-16, (article identifier: 0275025), 2026.

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Q2 Cell Biology (2024)

Q1 Ecology (2024)

Q2 Genetics (2024)

Q1 Immunology and Microbiology (miscellaneous) (2024)

Q1 Infectious Diseases (2024)

Q1 Microbiology (medical) (2024)

Q1 Physiology (2024)

8.

Kovács, S., Adácsi, C., Szarvas, P., Király, S., Miklós, I., Nampoothiri, K. M., Pócsi, I., Pusztahelyi, T.: Tejsavbaktériumokkal a fonalas gombák mikotoxinjai ellen.
In: Mikotoxinok és klímaváltozás : Kockázatok és megoldások a biztonságos élelmiszerért : Tanulmánykötet. Szerk.: Kovács Melinda, MATE Press, Gödöllő, 203-221, 2026. ISBN: 9789636231408

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9.

Pócsi, I., Kozák, L., Király, A., Kocsis, B., Sandugash, I., Leiter, É., Molnár, I.: Agrobacterium tumefaciens-mediated transformation of filamentous fungi.
In: Book of Abstracts / Centre For Industrial Biotechnology Research (CIBR), Siksha ♭O' Anusandhan (Deemed to be University), Bhubaneswar, Odisha, India, 83, 2025.

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10.

Tóth, Z., Balázs, B., Pfliegler, V. P., Csoma, E., Majoros, L., Szűcs, D., Kovács, R. L.: Application of Biofire Filmarray Joint Infection Panel for Rapid Identification of Aetiology in a Necrotizing Fasciitis Case.
Diagnostics. 15 (1), 1-8, (article identifier: 58), 2025.

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Q2 Clinical Biochemistry (2024)

Q2 Internal Medicine (2024)

11.

Kocsis, B., Pócsi, I., Leiter, É.: BbAtfA plays an important role in the growth, stress response and conidiation of the insect pathogenic fungus Beauveria bassiana.
In: Abstracts of the 7th Central European Forum for Microbiology / Hungarian Society for Microbiology, Hungarian Society for Microbiology, Siófok, 37, 2025.

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12.

Krishnan, S. V., Anaswara, P. A., Nampoothiri, K. M., Kovács, S., Adácsi, C., Szarvas, P., Király, S., Pócsi, I., Pusztahelyi, T.: Biocontrol Activity of New Lactic Acid Bacteria Isolates Against Fusaria and Fusarium Mycotoxins.
Toxins. 17 (2), 1-20, (article identifier: 68), 2025.

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Q1 Health, Toxicology and Mutagenesis (2024)

Q1 Toxicology (2024)

13.

Papp, L. A., Adácsi, C., Ács-Szabó, L., Batta, G., Csoma, H., Pusztahelyi, T., Pócsi, I., Miklós, I.: Biocontrol effect of schizosaccharomyces japonicus on fusarium graminearum and its potential genes for detoxification.
In: Biotechnology at the University of Debrecen - 2025 International Symposium: Abstract book

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14.

Alder-Rangel, A., Rangel, A. E., Casadevall, A., Pócsi, I., Rangel, D. E. N.: Celebrating the fifth edition of the International Symposium on Fungal Stress - ISFUS, a decade after its 2014 debut.
Fungal Biol. 129 (5), 1-25, (article identifier: 101590), 2025.

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Q2 Ecology, Evolution, Behavior and Systematics (2024)

Q3 Genetics (2024)

Q3 Infectious Diseases (2024)

Q2 Plant Science (2024)

15.

Pusztahelyi, T., Kovács, S., Mwalugha, H. W., Molnár, K., Dobos, A., Pfliegler, V. P., Pócsi, I.: Characterisation Of Endemic Aspergillus Flavus Strains in In Vitro And Microplot Field Experiments.
In: Abstracts of the 7th Central European Forum for Microbiology / Hungarian Society for Microbiology, Hungarian Society for Microbiology, Siófok, 67, 2025.

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16.

Emri, T., Varga, K. E., Benkő, Z., Pócsi, I.: Characterization of the ZipV transcription factor in Aspergillus fumigatus.
In: Abstracts of the 7th Central European Forum for Microbiology / Hungarian Society for Microbiology, Hungarian Society for Microbiology, Siófok, 19-20, 2025.

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17.

Rácz, H. V., Imre, A., Németh, B., Antunovics, Z., Bazenova, R., Bendixsen, D., Harmath, A., Herman, L., Fülep, Á., Lopandic, K., Máthé, E., Póliska, S., Pócsi, I., Stelkens, R., Pfliegler, V. P.: Commercial Saccharomyces cerevisiae baker's yeasts: strain redundancy, genome plasticity, and colonization of the sourdough environment and the human body.
bioRxiv. 1, 1-47, 2025.

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18.

Pusztahelyi, T., Mwalugha, H. W., Molnár, K., Kovács, S., Adácsi, C., Pócsi, I., Pfliegler, V. P., Dobos, A.: Competitive exclusion of aspergillus flavus: evaluation of in vitro and microplot field experiments.
In: , Department of Molecular Biotechnology and Microbiology, Institute of Biotechnology, Faculty of Science and Technology, University of Debrecen, Debrecen, 20, 2025. ISBN: 9789634907374

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19.

Király, A., Ambrus, V. A., Farkas, D., Abdalla, N., Dobránszki, J.: Differential Alteration of Gene Expression by Benzyl Adenine and meta-Topolin in In Vitro Apple Shoots.
Plants-Basel. 14 (23), 1-25, (article identifier: 3691), 2025.

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Q1 Ecology (2024)

Q1 Ecology, Evolution, Behavior and Systematics (2024)

Q1 Plant Science (2024)

20.

Pócsi, I., Bodnár, V., Vig, I., Király, A., Miskei, M., Leiter, É., De Vries, R. P., Emri, T.: Exploitation of comparative genomics data in industrial Aspergillus strain development.
In: Abstract Book / Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, India, 46-47, 2025.

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21.

Kutasy, B., Hegedűs, G., Kiniczky, M., Pallos, J. P., Nagy, Á., Pócsi, I., Pákozdi, K., Kállai, M., Weingart, C., Andor, K., Kovács, B., Virág, E.: Garlic Extracts Nanoliposome as an Enhancer of Bioavailability of ABA and Thiamine Content and as an Antifungal Agent Against Fusarium oxysporum f. sp. pisi Infecting Pisum sativum.
Agronomy. 15 (4), 1-29, (article identifier: 991), 2025.

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Q1 Agronomy and Crop Science (2024)

22.

Miskei, M., Ibragimova, S., Kocsis, B., Nagy, T., Park, H. S., Emri, T., Yu, J. H., Leiter, É., Pócsi, I.: Genome-Wide Mapping Reveals an Extensive AtfA Regulatory Influence on Development, Metabolism, and Stress Preparedness in Aspergillus nidulans.
Cells. 14 (24), 1-38, (article identifier: 1965), 2025.

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Q1 Biochemistry, Genetics and Molecular Biology (miscellaneous) (2024)

23.

Pfliegler, V. P., Németh, B., Bodnár, V., Pusztahelyi, T., Carbone, I., Pócsi, I.: Global population genomics redefines domestication and clinical diversity in the Aspergillus flavus-oryzae complex.
IMA Fungus. 16, 1-28, (article identifier: 172343), 2025.

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D1 Agricultural and Biological Sciences (miscellaneous) (2024)

D1 Ecology, Evolution, Behavior and Systematics (2024)

D1 Plant Science (2024)

24.

Al-Hamadani, M. N. A., Poroszlay, R., Szemán-Nagy, G., Hajdu, A., Hadjidemetriou, S., Ferrarini, L., Harangi, B.: Improving Cell Detection and Tracking in Microscopy Images Using YOLO and an Enhanced DeepSORT Algorithm.
Sensors. 25 (14), 1-15, (article identifier: 4361), 2025.

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Q1 Analytical Chemistry (2024)

Q2 Atomic and Molecular Physics, and Optics (2024)

Q2 Biochemistry (2024)

Q2 Electrical and Electronic Engineering (2024)

Q2 Information Systems (2024)

Q1 Instrumentation (2024)

Q2 Medicine (miscellaneous) (2024)

25.

Vig, I., Szarka, M., Fenyvesi, A., Gila, C. B., Antal, K., Szikszai, Z., Pócsi, I., Emri, T.: In the shadow of the solar flare: a study of antioxidant protection during lowintensity, short-duration proton irradiation in Aspergillus nidulans.
In: Abstracts of the 7th Central European Forum for Microbiology / Hungarian Society for Microbiology, Hungarian Society for Microbiology, Siófok, 84, 2025.

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Molekuláris Biotechnológiai és Mikrobiológiai Tanszék

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