The library will operate on a duty schedule between 22 December 2025 and 4 January 2026. During this period, it will be possible to upload publications, but all other services will be suspended.
Kiss, M.,
Halász, L.,
Hadadi, É.,
Berger, W. K.,
Tzerpos, P.,
Póliska, S.,
Kancheva, D.,
Gabriel, A.,
Barthelmess, R. M.,
Debraekeleer, A.,
Brughmans, J.,
Elkrim, Y.,
Martens, L.,
Saeys, Y.,
Dániel, B.,
Czimmerer, Z.,
Laoui, D.,
Nagy, L.,
Van Ginderachter, J. A.:
Epigenomic preconditioning of peripheral monocytes determines their transcriptional response to the tumor microenvironment.
Genome Med. 17 (1), 1-17, (article identifier: 82), 2025.
Dániel, B.,
Belk, J. A.,
Meier, S. L.,
Chen, A. Y.,
Sándor, K.,
Czimmerer, Z.,
Varga, Z.,
Bene, K.,
Buquicchio, F. A.,
Qi, Y.,
Kitano, H.,
Wheeler, J. R.,
Foster, D. S.,
Januszyk, M.,
Longaker, M. T.,
Chang, H. Y.,
Satpathy, A. T.:
Macrophage inflammatory and regenerative response periodicity is programmed by cell cycle and chromatin state.
Mol. Cell. 83 (1), 121-138, 2023.
Patsalos, A.,
Halász, L.,
Medina-Serpas, M. A.,
Berger, W. K.,
Dániel, B.,
Tzerpos, P.,
Kiss, M.,
Nagy, G.,
Fischer, C.,
Simándi, Z.,
Varga, T.,
Nagy, L.:
A growth factor-expressing macrophage subpopulation orchestrates regenerative inflammation via GDF-15.
J. Exp. Med. 219 (1), 1-38, (article identifier: 20210420), 2022.
Göczi, L.,
Csumita, M.,
Horváth, A.,
Nagy, G.,
Póliska, S.,
Pigni, M.,
Thelemann, C.,
Dániel, B.,
Mianesaz, H.,
Varga, T.,
Sen, K.,
Raghav, S. K.,
Schoggins, J. W.,
Nagy, L.,
Acha-Orbea, H.,
Meissner, F.,
Reith, W.,
Széles, L.:
A Multi-Omics Approach Reveals Features That Permit Robust and Widespread Regulation of IFN-Inducible Antiviral Effectors.
J. Immun. 209 (10), 1930-1941, 2022.
Nagy, G.,
Dániel, B.,
Cuaranta-Monroy, I.,
Nagy, L.:
Unraveling the Hierarchy of cis and trans Factors That Determine the DNA Binding by Peroxisome Proliferator-Activated Receptor γ.
Mol. Cell. Biol. 40 (7), 1-20, (article identifier: 00547), 2020.
Moreira, T. G.,
Horta, L. S.,
Gomes-Santos, A. C.,
Oliveira, R. P.,
Queiroz, N. M. G. P.,
Mangani, D.,
Dániel, B.,
Vieira, A. T.,
Liu, S.,
Rodrigues, A. M.,
Gomes, D. A.,
Gabriely, G.,
Ferreira, E.,
Weiner, H. L.,
Rezende, R. M.,
Nagy, L.,
Faria, A. M. C.:
CLA-supplemented diet accelerates experimental colorectal cancer by inducing TGF-β-producing macrophages and T cells.
Mucosal Immunol. 12 (1), 188-199, 2019.
Czimmerer, Z.,
Horváth, A.,
Dániel, B.,
Nagy, G.,
Cuaranta-Monroy, I.,
Kiss, M.,
Kolostyák, Z.,
Póliska, S.,
Steiner, L.,
Giannakis, N.,
Varga, T.,
Nagy, L.:
Dynamic transcriptional control of macrophage miRNA signature via inflammation responsive enhancers revealed using a combination of next generation sequencing-based approaches.
Biochim. Biophys. Acta. Gene Regul. Mech. 1861 (1), 14-28, 2018.
Czimmerer, Z.,
Nagy, Z. S.,
Nagy, G.,
Horváth, A.,
Silye-Cseh, T.,
Kriston, Á.,
Jonás, D.,
Sauer, S.,
Steiner, L.,
Dániel, B.,
Deleuze, J. F.,
Nagy, L.:
Extensive and functional overlap of the STAT6 and RXR cistromes in the active enhancer repertoire of human CD14+ monocyte derived differentiating macrophages.
Mol. Cell. Endocrinol. 471, 63-74, 2018.
Dániel, B.,
Nagy, G.,
Horváth, A.,
Czimmerer, Z.,
Cuaranta-Monroy, I.,
Póliska, S.,
Hays, T. T.,
Sauer, S.,
Francois-Deleuze, J.,
Nagy, L.:
The IL-4/STAT6/PPAR[gamma] signaling axis is driving the expansion of the RXR heterodimer cistrome, providing complex ligand responsiveness in macrophages.
Nucleic Acids Res. 46 (9), 4425-4439, 2018.
Dániel, B.,
Nagy, G.,
Czimmerer, Z.,
Horváth, A.,
Hammers, D. W.,
Cuaranta-Monroy, I.,
Póliska, S.,
Tzerpos, P.,
Kolostyák, Z.,
Hays, T. T.,
Patsalos, A.,
Houtman, R.,
Sauer, S.,
Francois-Deleuze, J.,
Rastinejad, F.,
Bálint, B. L.,
Sweeney, H. L.,
Nagy, L.:
The Nuclear Receptor PPAR[gamma] Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory.
Immunity. 49 (4), 615-626, 2018.
Varga, T.,
Mounier, R.,
Patsalos, A.,
Gogolák, P.,
Peloquin, M.,
Horváth, A.,
Pap, A.,
Dániel, B.,
Nagy, G.,
Pintye, É.,
Póliska, S.,
Cuvellier, S.,
Ben Larbi, S.,
Sansbury, B. E.,
Spite, M.,
Brown, C. W.,
Chazaud, B.,
Nagy, L.:
Macrophage PPAR[gamma], a Lipid Activated Transcription Factor Controls the Growth Factor GDF3 and Skeletal Muscle Regeneration.
Immunity. 45 (5), 1038-1051, 2016.
Roqueta-Rivera, M.,
Esquejo, R. M.,
Phelan, P. E.,
Sándor, K.,
Dániel, B.,
Foufelle, F.,
Ding, J.,
Li, X.,
Khorasanizadeh, S.,
Osborne, T. F.:
SETDB2 Links Glucocorticoid to Lipid Metabolism through Insig2a Regulation.
Cell Metab. 24 (3), 474-484, 2016.
Czimmerer, Z.,
Varga, T.,
Kiss, M.,
Vázquez, C. O.,
Doan-Xuan, Q. M.,
Rückerl, D.,
Tattikota, S. G.,
Yan, X.,
Nagy, Z. S.,
Dániel, B.,
Póliska, S.,
Horváth, A.,
Nagy, G.,
Varallyay, É.,
Poy, M. N.,
Allen, J. E.,
Bacsó, Z.,
Abreu-Goodger, C.,
Nagy, L.:
The IL-4/STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3p.
Genome Med. 8 (1), 1-22, 2016.
Brázda, P.,
Krieger, J. W.,
Dániel, B.,
Jonás, D.,
Szekeres, T.,
Langowski, J.,
Tóth, K. Á.,
Nagy, L.,
Vámosi, G.:
Ligand binding shifts highly mobile RXR to chromatin-bound state in a coactivator-dependent manner as revealed by single cell imaging.
Mol. Cell. Biol. 34 (7), 1234-1245, 2014.
Dániel, B.,
Bálint, B. L.,
Nagy, Z.,
Nagy, L.:
Mapping the genomic binding sites of the activated retinoid x receptor in murine bone marrow-derived macrophages using chromatin immunoprecipitation sequencing.
Methods. Mol. Biol. 1204, 15-24, 2014.
Dániel, B.,
Nagy, G.,
Nagy, L.:
The intriguing complexities of mammalian gene regulation: how to link enhancers to regulated genes. Are we there yet?.
FEBS Lett. 588 (15), 2379-2391, 2014.
Nagy, G.,
Dániel, B.,
Jonás, D.,
Nagy, L.,
Barta, E.:
A novel method to predict regulatory regions based on histone mark landscapes in macrophages.
Immunobiology. 218 (11), 1416-1427, 2013.
Brignull, L. M.,
Czimmerer, Z.,
Saidi, H.,
Dániel, B.,
Villela, I.,
Bartlett, N. W.,
Johnston, S. L.,
Meira, L. B.,
Nagy, L.,
Nohturfft, A.:
Reprogramming of lysosomal gene expression by interleukin-4 and Stat6.
BMC Genomics. 14 (1), 1-20, 2013.
