Department of Biochemical Engineering

1.

Flipphi, M., Harispe, M. L., Hamari, Z., Kocsubé, S., Scazzocchio, C., Ramón, A.: An ascomycete H4 variant with an unknown function.
R. Soc. Open Sci. 11 (2), 1-16, (article identifier: 231705), 2024.

doi DEA WoS Scopus

Journal metrics:

Q1 Multidisciplinary (2023)

2.

Karaffa, L., Fekete, E., Pfliegler, V. P., Leiter, É., Emri, T., Pócsi, I.: Biomérnöki és biotechnológiai képzési formák a Debreceni Egyetem természettudományi és technológiai karán.
In: Biotechnológia a Debreceni Egyetemen 2024 Szimpózium : Absztraktfüzet, Debrecen Egyetem, Debrecen, 22-23, 2024. ISBN: 9789634906612

DEA

3.

Karaffa, E. M., Kovács, C., Karaffa, L., Csótó, A.: Endophytic Trichoderma strains open new perspectives for fungi biocontrol.
In: 29. Tiszántúli Növényvédelmi Fórum / 11th International Plant Protection Symposium at University of Debrecen: Program - Programme. Szerk.: Tarcali Gábor, Kövics György János, Debreceni Egyetem, MÉK Növényvédelmi Intézet, Debrecen, 25-26, 2024.

DEA

4.

Csótó, A., Tóth, G., Riczu, P., Zabiák, A., Tarjányi, V., Fekete, E., Karaffa, L., Karaffa, E. M.: Foliar spraying with endophytic Trichoderma biostimulant increases drought resilience of Maize and Sunflower.
Agriculture-Basel. 14 (12), 1-12, (article identifier: 2360), 2024.

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Journal metrics:

Q1 Agronomy and Crop Science (2023)

Q2 Food Science (2023)

Q2 Plant Science (2023)

5.

Fekete, E., Bíró, V., Márton, A., Bakondi-Kovács, I., Karaffa, E. M., Kovács, B., Geoffrion, N., Tsang, A., Kubicek, C. P., Karaffa, L.: Transcriptomics identify the triggering of citrate export as the key event caused by manganese deficiency in.
Microbiol. Spectr. -, 1-18, (article identifier: 01906), 2024.

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Journal metrics:

Q2 Cell Biology (2023)

Q1 Ecology (2023)

Q2 Genetics (2023)

Q1 Immunology and Microbiology (miscellaneous) (2023)

Q2 Microbiology (medical) (2023)

Q1 Infectious Diseases (2023)

Q1 Physiology (2023)

6.

Zabiák, A., Kovács, C., Takács, F., Pál, K., Peles, F., Fekete, E., Karaffa, L., Mihály, K., Flipphi, M., Karaffa, E. M.: Diaporthe and Diplodia species associated with walnut (Juglans regia L.) in Hungarian orchards.
Horticulturae. 9 (2), 1-15, (article identifier: 205), 2023.

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Q1 Horticulture

Q2 Plant Science

7.

Tóth, B., Grusak, M. A., Maryke, L., Guzmán, C., Szőke, L., Kaczur, D., Harangi, R., Kovács, B., Radócz, L., Makhsatova, S., Danter, M., Nagy, J., Moloi, M. J.: Evaluation of the Impacts of Stressors on Crops in the Context of Climate Change.
In: Proceedings Zbornik INSORE 2023 / Kristina Kljak, Klaudija Carović-Stanko, University of Zagreb Faculty of Agriculture, Zagreb, 33, 2023. ISBN: 9789538276422

DEA

8.

Flipphi, M., Márton, A., Bíró, V., Ág, N., Karaffa, E. M., Fekete, E., Karaffa, L.: Generation, Transfer, and Loss of Alternative Oxidase Paralogues in the Aspergillaceae Family.
J. Fungi. 9 (12), 1-18, (article identifier: 1195), 2023.

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Journal metrics:

Q1 Ecology, Evolution, Behavior and Systematics

Q2 Microbiology (medical)

Q1 Plant Science

9.

Csótó, A., Nagy, A., Laurinyecz, N., Nagy, Z., Németh, C., Németh, E. K., Csikászné Krizsics, A., Rakonczás, N., Fontaine, F., Fekete, E., Flipphi, M., Karaffa, L., Karaffa, E. M.: Hybrid Vitis Cultivars with American or Asian Ancestries Show Higher Tolerance towards Grapevine Trunk Diseases.
Plants-Basel. 12 (12), 1-16, (article identifier: 2328), 2023.

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Journal metrics:

Q1 Ecology

Q1 Ecology, Evolution, Behavior and Systematics

Q1 Plant Science

10.

Reinfurt, A., Fritsche, S., Bíró, V., Márton, A., Ellena, V., Fekete, E., Karaffa, E. M., Karaffa, L., Steiger, M. G.: Manganese(II) ions suppress the transcription of the citrate exporter encoding gene cexA in Aspergillus niger.
Front. Bioeng. Biotechnol. 11, 1-11, (article identifier: 1292337), 2023.

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Journal metrics:

Q2 Bioengineering

Q1 Biomedical Engineering

Q2 Biotechnology

Q2 Histology

11.

Flipphi, M., Márton, A., Bíró, V., Ág, N., Karaffa, E. M., Fekete, E., Karaffa, L.: Mutations in the Second Alternative Oxidase Gene: A New Approach to Group Aspergillus niger Strains.
J. Fungi. 9 (5), 1-17, (article identifier: 570), 2023.

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Journal metrics:

Q1 Ecology, Evolution, Behavior and Systematics

Q2 Microbiology (medical)

Q1 Plant Science

12.

Csótó, A., Kovács, C., Pál, K., Nagy, A., Peles, F., Fekete, E., Karaffa, L., Kubicek, C. P., Karaffa, E. M.: The Biocontrol Potential of Endophytic Trichoderma Fungi Isolated from Hungarian Grapevines, Part II, Grapevine Stimulation.
Pathogens. 12 (1), 1-14, (article identifier: 2), 2023.

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Journal metrics:

Q2 Immunology and Allergy

Q2 Immunology and Microbiology (miscellaneous)

Q2 Microbiology (medical)

Q2 Infectious Diseases

Q2 Molecular Biology

13.

Bokor, E., Ámon, J., Varga, M., Szekeres, A., Hegedűs, Z., Jakusch, T., Szakonyi, Z., Flipphi, M., Vágvölgyi, C., Gácser, A., Scazzocchio, C., Hamari, Z.: A complete nicotinate degradation pathway in the microbial eukaryote Aspergillus nidulans.
Commun. Biol. 5 (1), 1-11, 2022.

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Journal metrics:

D1 Biochemistry, Genetics and Molecular Biology (miscellaneous)

D1 Agricultural and Biological Sciences (miscellaneous)

D1 Medicine (miscellaneous)

14.

Fekete, E., Bíró, V., Márton, A., Bakondi-Kovács, I., Németh, Z., Karaffa, E. M., Kovács, B., Fábián, I., Kubicek, C. P., Tsang, A., Karaffa, L.: Bioreactor as the root cause of the "manganese effect" during Aspergillus niger citric acid fermentations.
Front. Bioeng. Biotechnol. 10, 1-12, 2022.

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Journal metrics:

Q2 Bioengineering

Q1 Biomedical Engineering

Q1 Biotechnology

Q2 Histology

15.

Kovács, C., Csótó, A., Pál, K., Nagy, A., Fekete, E., Karaffa, L., Kubicek, C. P., Karaffa, E. M.: Endophytic Trichoderma spp. from Hungarian grapevines with biocontrol potential.
In: 16th Congress of the Mediterranean Phytopathological Union : Book of abstracts, [s.n.], [s.l.], 1, 2022.

DEA

16.

B-Béres, V., Kókai, Z., Várbíró, G., Mustazhapova, G., Csabai, Z., Pernecker, B., Borics, G., Bácsi, I., Boda, P.: Flow Intermittence Drives the Benthic Algal Composition, Biodiversity and Diatom-Based Quality of Small Hilly Streams in the Pannonian Ecoregion, Hungary.
Front. Ecol. Evol. 10, 1-12, 2022.

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Journal metrics:

Q1 Ecology

Q1 Ecology, Evolution, Behavior and Systematics

17.

Meng, J., Németh, Z., Peng, M., Fekete, E., Garrigues, S., Lipzen, A., Ng, V., Savage, E., Zhang, Y., Grigoriev, I. V., Mäkelä, M. R., Karaffa, L., De Vries, R. P.: GalR, GalX and AraR co-regulate D-galactose and L-arabinose utilization in Aspergillus nidulans.
Microbial Biotechnology. 15 (6), 1839-1851, 2022.

doi DEA WoS Scopus

18.

Fodor, A., Gualtieri, M., Zeller, M., Tarasco, E., Klein, M. G., Fodor, A. M., Haynes, L., Lengyel, K., Forst, S. A., Furgani, G. M., Karaffa, L., Vellai, T.: Type Strains of Entomopathogenic Nematode-Symbiotic Bacterium Species, Xenorhabdus szentirmaii (EMC) and X. budapestensis (EMA), Are Exceptional Sources of Non-Ribosomal Templated, Large-Target-Spectral, Thermotolerant-Antimicrobial Peptides (by Both), and Iodinin (by EMC).
Pathogens. 11 (3), 1-29, (article identifier: 342), 2022.

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Journal metrics:

Q2 Immunology and Allergy

Q2 Immunology and Microbiology (miscellaneous)

Q2 Infectious Diseases

Q2 Microbiology (medical)

Q2 Molecular Biology

19.

Fekete, E., Pénzes, F., Ág, N., Ág-Rácz, V., Karaffa, E. M., Scazzocchio, C., Flipphi, M., Karaffa, L.: Unique and Repeated Stwintrons (Spliceosomal Twin Introns) in the Hypoxylaceae.
J. Fungi. 8 (4), 1-23, 2022.

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Journal metrics:

Q1 Ecology, Evolution, Behavior and Systematics

Q2 Microbiology (medical)

Q1 Plant Science

20.

Karaffa, E. M., Kolláth, I. S., Fekete, E., Bíró, V., Flipphi, M., Kovács, B., Kubicek, C. P., Karaffa, L.: Carbon-source dependent interplay of copper and manganese ions modulates the morphology and itaconic acid production in Aspergillus terreus.
Front. Microbiol. 12, 1-14, 2021.

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Journal metrics:

Q1 Microbiology

Q1 Microbiology (medical)

21.

Fekete, E., Pénzes, F., Ág, N., Scazzocchio, C., Flipphi, M., Karaffa, L.: Internally Symmetrical Stwintrons and Related Canonical Introns in Hypoxylaceae Species.
J. Fungi. 7, 1-21, 2021.

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Journal metrics:

Q1 Ecology, Evolution, Behavior and Systematics

Q2 Microbiology (medical)

Q1 Plant Science

22.

Kovács, C., Csótó, A., Pál, K., Nagy, A., Fekete, E., Karaffa, L., Kubicek, C. P., Karaffa, E. M.: The Biocontrol Potential of Endophytic Trichoderma Fungi Isolated from Hungarian Grapevines. Part I. Isolation, Identification and In Vitro Studies.
Pathogens. 10 (12), 1-19, 2021.

doi DEA WoS Scopus

Journal metrics:

Q2 Immunology and Allergy

Q2 Immunology and Microbiology (miscellaneous)

Q2 Infectious Diseases

Q2 Microbiology (medical)

Q2 Molecular Biology

23.

Karaffa, L., Fekete, E., Kubicek, C. P.: The role of metal ions in fungal organic acid accumulation.
Microorganisms. 9 (6), 1-16, 2021.

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Journal metrics:

Q2 Microbiology

Q2 Microbiology (medical)

Q3 Virology

24.

Ág, N., Kavalecz, N., Pénzes, F., Karaffa, L., Scazzocchio, C., Flipphi, M., Fekete, E.: Complex intron generation in the yeast genus Lipomyces.
Sci. Rep. 10, 1-10, 2020.

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Journal metrics:

D1 Multidisciplinary

25.

Fejes, B., Ouedraogo, J. P., Fekete, E., Karaffa, E. M., Flipphi, M., Soós, Á., Molnár, Á. P., Kovács, B., Kubicek, C. P., Tsang, A., Karaffa, L.: The effects of external Mn2+ concentration on hyphal morphology and citric acid production are mediated primarily by the NRAMP-family transporter DmtA in Aspergillus niger.
Microb Cell Fact. 19 (1), 1-11, (article identifier: 17), 2020.

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Journal metrics:

Q1 Applied Microbiology and Biotechnology

Q1 Bioengineering

Q1 Biotechnology

Department of Biochemical Engineering

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